BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B06SP1|AL429016
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1529 1737 0.0
>3x_Contig1529
Length = 11812
Score = 1737 bits (875), Expect = 0.0
Identities = 894/899 (99%), Gaps = 2/899 (0%)
Strand = Plus / Minus
Query: 1 gaacaagcagtaactttgggaaaatatctggcccctcgaattttgtcgtaaataactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7109 gaacaagcagtaactttgggaaaatatctggcccctcgaattttgtcgtaaataactcaa 7050
Query: 61 aaaactcattgccaaaaagagtcatgtccactcaacatgagtccccattcaatagttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7049 aaaactcattgccaaaaagagtcatgtccactcaacatgagtccccattcaatagttctt 6990
Query: 121 cagcagctgccgctttgtcatccacagtatcaccttcagctaccacacacccgccaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6989 cagcagctgccgctttgtcatccacagtatcaccttcagctaccacacacccgccaaatt 6930
Query: 181 ctgcttccagtggaccgtctcagagctctgtgaatggaaatagcataacatcaacatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6929 ctgcttccagtggaccgtctcagagctctgtgaatggaaatagcataacatcaacatctt 6870
Query: 241 caagaccattgaaatcaatggtcgatgttgtgccaccctcagaaacaaacaagaaagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6869 caagaccattgaaatcaatggtcgatgttgtgccaccctcagaaacaaacaagaaagact 6810
Query: 301 tcccaactcttgacccacgcccaaatattcgccaaaccagtgttgcaccatccgttgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6809 tcccaactcttgacccacgcccaaatattcgccaaaccagtgttgcaccatccgttgcca 6750
Query: 361 ccaccgaaactatgamaaggccaccatcaacagtacaaactattgggtcattaccgcctg 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6749 ccaccgaaactatgacaaggccaccatcaacagtacaaactattgggtcattaccgcctg 6690
Query: 421 gtactgcaaaagatttcaagacatttgcagttcccctagagaatcttctggattacgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6689 gtactgcaaaagatttcaagacatttgcagttcccctagagaatcttctggattacgatc 6630
Query: 481 aagatcttgtaccggctattgtccgccaatgtatctacgttattgacaaatacggtctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6629 aagatcttgtaccggctattgtccgccaatgtatctacgttattgacaaatacggtctaa 6570
Query: 541 acttggagggcatttatcgtaaatctgcaaacgttcttgatgtgtcacgactcaaaagtg 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6569 acttggaggg-atttatcgtaaatctgcaaacgttcttgatgtgtcacgactcaaaagtg 6511
Query: 601 aaattgataaggacccatccaacgtctttatgatcttaccaccgaagaactacactgact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6510 aaattgataaggacccatccaacgtctttatgatcttaccaccgaagaactacactgact 6451
Query: 661 ctgatatttatctggtaggttctttgttaaaaacattttttgctaatctccctgatactc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6450 ctgatatttatctggtaggttctttgttaaaaacattttttgctaatctccctgatactc 6391
Query: 721 ttttaccaagagaaatgaccgaagaaattaaaacgtgtctatcgattgaagattcaacta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6390 ttttaccaagagaaatgaccgaagaaattaaaacgtgtctatcgattgaagattcaacta 6331
Query: 781 ccagaaaaaactatatgcacggtatcatctataaactacctgatggtcaatattggacga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6330 ccagaaaaaactatatgcacggtatcatctataaactacctgatggtcaatattggacga 6271
Query: 841 taagagcattgatattccaatttgaaacgtattttggaacacgaaactaaaaamagaat 899
|||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct: 6270 taagagcattgatattcc-atttgatacgtattttggaacacgaaactaaaaacagaat 6213
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6673
Number of Sequences: 1807
Number of extensions: 6673
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)